Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 SLC25A6P4-201ENST00000586535 553 ntBASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 AC005336.2-201ENST00000593183 939 ntBASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 AC008687.5-201ENST00000593746 558 ntBASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 REXO1L6P-202ENST00000619970 1078 ntBASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNFT1Q5M7Z0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 LINC00602-201ENST00000629776 2065 ntBASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 ANO7L1-203ENST00000602586 1720 ntBASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 MIR5100-201ENST00000579544 119 ntBASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNFT1Q5M7Z0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 POM121L3P-201ENST00000419331 1163 ntBASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 SAPCD2P3-201ENST00000455031 850 ntBASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 AC106795.1-205ENST00000512851 1056 ntBASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.41■□□□□ 0.22
RNFT1Q5M7Z0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RNFT1Q5M7Z0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNFT1Q5M7Z0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNFT1Q5M7Z0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.4■□□□□ 0.22
RNFT1Q5M7Z0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.4■□□□□ 0.22
RNFT1Q5M7Z0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNFT1Q5M7Z0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNFT1Q5M7Z0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNFT1Q5M7Z0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNFT1Q5M7Z0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNFT1Q5M7Z0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms