Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRFAM7AQ494W8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 INGX-201ENST00000359239 846 ntBASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 AC083906.6-201ENST00000641366 219 ntBASIC16.02■□□□□ 0.16
CHRFAM7AQ494W8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHRFAM7AQ494W8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.02■□□□□ 0.15
CHRFAM7AQ494W8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHRFAM7AQ494W8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CHRFAM7AQ494W8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
CHRFAM7AQ494W8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHRFAM7AQ494W8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CHRFAM7AQ494W8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHRFAM7AQ494W8 NOC2LP2-201ENST00000407594 1944 ntBASIC16.02■□□□□ 0.15
CHRFAM7AQ494W8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 AC004980.1-204ENST00000429707 299 ntBASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 DUSP5P1-201ENST00000441325 1139 ntBASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 HCG4P8-203ENST00000443049 980 ntBASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 AL138966.2-201ENST00000621997 464 ntBASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 AL031432.5-201ENST00000641059 760 ntBASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRFAM7AQ494W8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHRFAM7AQ494W8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRFAM7AQ494W8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CHRFAM7AQ494W8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CHRFAM7AQ494W8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CHRFAM7AQ494W8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRFAM7AQ494W8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16■□□□□ 0.15
CHRFAM7AQ494W8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHRFAM7AQ494W8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
CHRFAM7AQ494W8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRFAM7AQ494W8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms