Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 AC125634.1-201ENST00000438758 1403 ntBASIC17.75■□□□□ 0.43
CACNA1EQ15878 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA1EQ15878 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.75■□□□□ 0.43
CACNA1EQ15878 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA1EQ15878 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA1EQ15878 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.75■□□□□ 0.43
CACNA1EQ15878 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CACNA1EQ15878 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 AL356309.3-201ENST00000624132 1934 ntBASIC17.75■□□□□ 0.43
CACNA1EQ15878 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.75■□□□□ 0.43
CACNA1EQ15878 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CACNA1EQ15878 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 DNAJB3-202ENST00000449667 1266 ntBASIC17.74■□□□□ 0.43
CACNA1EQ15878 KRT18P3-201ENST00000451602 1288 ntBASIC17.74■□□□□ 0.43
CACNA1EQ15878 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CACNA1EQ15878 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CACNA1EQ15878 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CACNA1EQ15878 AL161938.1-201ENST00000569833 2180 ntBASIC17.73■□□□□ 0.43
CACNA1EQ15878 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CACNA1EQ15878 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1EQ15878 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1EQ15878 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1EQ15878 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CACNA1EQ15878 GPX1P2-201ENST00000429271 606 ntBASIC17.72■□□□□ 0.43
CACNA1EQ15878 MTCL1P1-201ENST00000446207 792 ntBASIC17.72■□□□□ 0.43
CACNA1EQ15878 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.72■□□□□ 0.43
CACNA1EQ15878 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.72■□□□□ 0.43
CACNA1EQ15878 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1EQ15878 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.72■□□□□ 0.43
CACNA1EQ15878 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CACNA1EQ15878 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms