Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.02□□□□□ -0.16
HIST1H1AQ02539 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 TSPY20P-201ENST00000450910 630 ntBASIC14.02□□□□□ -0.17
HIST1H1AQ02539 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HIST1H1AQ02539 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 SIRPAP1-201ENST00000448467 1770 ntBASIC14.01□□□□□ -0.17
HIST1H1AQ02539 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 KRT8P3-201ENST00000519669 1449 ntBASIC14.01□□□□□ -0.17
HIST1H1AQ02539 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 MIR6786-201ENST00000616843 113 ntBASIC14.01□□□□□ -0.17
HIST1H1AQ02539 ITM2C-210ENST00000620962 501 ntBASIC14.01□□□□□ -0.17
HIST1H1AQ02539 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST1H1AQ02539 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14□□□□□ -0.17
HIST1H1AQ02539 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 AL135905.2-201ENST00000584934 1404 ntBASIC14□□□□□ -0.17
HIST1H1AQ02539 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HIST1H1AQ02539 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HIST1H1AQ02539 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 AC067852.2-201ENST00000590513 2313 ntBASIC14□□□□□ -0.17
HIST1H1AQ02539 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14□□□□□ -0.17
HIST1H1AQ02539 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms