Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.98■□□□□ 0.15
HIST1H3AP68431 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 AC092865.7-201ENST00000641832 219 ntBASIC15.98■□□□□ 0.15
HIST1H3AP68431 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 AC099343.3-201ENST00000605834 2503 ntBASIC15.97■□□□□ 0.15
HIST1H3AP68431 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST1H3AP68431 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H3AP68431 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 AC073912.3-201ENST00000624414 853 ntBASIC15.96■□□□□ 0.15
HIST1H3AP68431 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.96■□□□□ 0.15
HIST1H3AP68431 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H3AP68431 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms