Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SEC61A1P61619 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SEC61A1P61619 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SEC61A1P61619 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SEC61A1P61619 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SEC61A1P61619 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SEC61A1P61619 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SEC61A1P61619 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.02■□□□□ 0.16
SEC61A1P61619 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.02■□□□□ 0.16
SEC61A1P61619 FAM207BP-201ENST00000447172 505 ntBASIC16.02■□□□□ 0.16
SEC61A1P61619 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.02■□□□□ 0.16
SEC61A1P61619 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.02■□□□□ 0.16
SEC61A1P61619 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SEC61A1P61619 AC145285.6-201ENST00000604632 637 ntBASIC16.02■□□□□ 0.16
SEC61A1P61619 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.02■□□□□ 0.16
SEC61A1P61619 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.02■□□□□ 0.16
SEC61A1P61619 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.02■□□□□ 0.16
SEC61A1P61619 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SEC61A1P61619 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SEC61A1P61619 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.02■□□□□ 0.16
SEC61A1P61619 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SEC61A1P61619 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.02■□□□□ 0.15
SEC61A1P61619 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.02■□□□□ 0.15
SEC61A1P61619 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.02■□□□□ 0.15
SEC61A1P61619 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
SEC61A1P61619 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.02■□□□□ 0.15
SEC61A1P61619 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.02■□□□□ 0.15
SEC61A1P61619 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.02■□□□□ 0.15
SEC61A1P61619 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SEC61A1P61619 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.02■□□□□ 0.15
SEC61A1P61619 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61A1P61619 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 LINC01568-207ENST00000641790 1380 ntBASIC16.01■□□□□ 0.15
SEC61A1P61619 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.01■□□□□ 0.15
SEC61A1P61619 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SEC61A1P61619 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.01■□□□□ 0.15
SEC61A1P61619 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.01■□□□□ 0.15
SEC61A1P61619 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.01■□□□□ 0.15
SEC61A1P61619 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.01■□□□□ 0.15
SEC61A1P61619 AP000692.2-201ENST00000608391 879 ntBASIC16.01■□□□□ 0.15
SEC61A1P61619 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SEC61A1P61619 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.01■□□□□ 0.15
SEC61A1P61619 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.01■□□□□ 0.15
SEC61A1P61619 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SEC61A1P61619 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SEC61A1P61619 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61A1P61619 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SEC61A1P61619 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16■□□□□ 0.15
SEC61A1P61619 AC126763.1-201ENST00000552015 2118 ntBASIC16■□□□□ 0.15
SEC61A1P61619 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16■□□□□ 0.15
SEC61A1P61619 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms