Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.68■□□□□ 0.26
CXCR4P61073 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.68■□□□□ 0.26
CXCR4P61073 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.68■□□□□ 0.26
CXCR4P61073 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.68■□□□□ 0.26
CXCR4P61073 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 UNC93B5-201ENST00000530315 699 ntBASIC16.68■□□□□ 0.26
CXCR4P61073 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.68■□□□□ 0.26
CXCR4P61073 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.68■□□□□ 0.26
CXCR4P61073 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.68■□□□□ 0.26
CXCR4P61073 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.68■□□□□ 0.26
CXCR4P61073 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.68■□□□□ 0.26
CXCR4P61073 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.68■□□□□ 0.26
CXCR4P61073 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
CXCR4P61073 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCR4P61073 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCR4P61073 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.67■□□□□ 0.26
CXCR4P61073 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CXCR4P61073 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCR4P61073 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CXCR4P61073 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CXCR4P61073 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCR4P61073 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCR4P61073 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CXCR4P61073 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.67■□□□□ 0.26
CXCR4P61073 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.67■□□□□ 0.26
CXCR4P61073 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.67■□□□□ 0.26
CXCR4P61073 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCR4P61073 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.67■□□□□ 0.26
CXCR4P61073 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.67■□□□□ 0.26
CXCR4P61073 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CXCR4P61073 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CXCR4P61073 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCR4P61073 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CXCR4P61073 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCR4P61073 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
CXCR4P61073 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCR4P61073 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 AC142086.2-201ENST00000569753 217 ntBASIC16.66■□□□□ 0.26
CXCR4P61073 AL138688.1-201ENST00000624851 1594 ntBASIC16.66■□□□□ 0.26
CXCR4P61073 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CXCR4P61073 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
CXCR4P61073 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCR4P61073 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
CXCR4P61073 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCR4P61073 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CXCR4P61073 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCR4P61073 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCR4P61073 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms