Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHA4P54764 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
EPHA4P54764 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
EPHA4P54764 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHA4P54764 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.58■□□□□ 0.41
EPHA4P54764 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
EPHA4P54764 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.58■□□□□ 0.41
EPHA4P54764 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHA4P54764 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHA4P54764 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.58■□□□□ 0.41
EPHA4P54764 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA4P54764 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EPHA4P54764 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
EPHA4P54764 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
EPHA4P54764 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.58■□□□□ 0.4
EPHA4P54764 IGHV3-47-201ENST00000425060 335 ntBASIC17.58■□□□□ 0.4
EPHA4P54764 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.58■□□□□ 0.4
EPHA4P54764 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
EPHA4P54764 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHA4P54764 AC091304.2-201ENST00000564639 760 ntBASIC17.58■□□□□ 0.4
EPHA4P54764 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.58■□□□□ 0.4
EPHA4P54764 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
EPHA4P54764 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
EPHA4P54764 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
EPHA4P54764 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA4P54764 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA4P54764 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA4P54764 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA4P54764 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHA4P54764 ANO7L1-203ENST00000602586 1720 ntBASIC17.58■□□□□ 0.4
EPHA4P54764 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA4P54764 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHA4P54764 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHA4P54764 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPHA4P54764 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
EPHA4P54764 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 LINC00167-201ENST00000530583 1419 ntBASIC17.57■□□□□ 0.4
EPHA4P54764 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.57■□□□□ 0.4
EPHA4P54764 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
EPHA4P54764 TSPY12P-201ENST00000421279 868 ntBASIC17.57■□□□□ 0.4
EPHA4P54764 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.57■□□□□ 0.4
EPHA4P54764 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
EPHA4P54764 FOSL1P1-201ENST00000511041 816 ntBASIC17.57■□□□□ 0.4
EPHA4P54764 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 IFNL4P1-201ENST00000607083 540 ntBASIC17.57■□□□□ 0.4
EPHA4P54764 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
EPHA4P54764 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHA4P54764 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EPHA4P54764 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
EPHA4P54764 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
EPHA4P54764 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.57■□□□□ 0.4
EPHA4P54764 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
EPHA4P54764 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.56■□□□□ 0.4
EPHA4P54764 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.56■□□□□ 0.4
EPHA4P54764 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
EPHA4P54764 AC026396.1-201ENST00000419388 421 ntBASIC17.56■□□□□ 0.4
EPHA4P54764 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.56■□□□□ 0.4
EPHA4P54764 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.56■□□□□ 0.4
EPHA4P54764 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHA4P54764 KRT18P31-201ENST00000506277 1292 ntBASIC17.56■□□□□ 0.4
EPHA4P54764 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHA4P54764 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.56■□□□□ 0.4
EPHA4P54764 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHA4P54764 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.56■□□□□ 0.4
EPHA4P54764 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.56■□□□□ 0.4
EPHA4P54764 AC099336.1-202ENST00000602961 463 ntBASIC17.56■□□□□ 0.4
EPHA4P54764 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
EPHA4P54764 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.56■□□□□ 0.4
EPHA4P54764 AL499627.1-201ENST00000569373 2188 ntBASIC17.56■□□□□ 0.4
EPHA4P54764 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHA4P54764 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms