Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3P54252 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.66■□□□□ 0.58
ATXN3P54252 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3P54252 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3P54252 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3P54252 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATXN3P54252 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATXN3P54252 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATXN3P54252 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATXN3P54252 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.65■□□□□ 0.58
ATXN3P54252 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3P54252 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 AC024243.1-201ENST00000609234 778 ntBASIC18.65■□□□□ 0.58
ATXN3P54252 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.65■□□□□ 0.58
ATXN3P54252 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3P54252 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.65■□□□□ 0.58
ATXN3P54252 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
ATXN3P54252 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ATXN3P54252 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.65■□□□□ 0.58
ATXN3P54252 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3P54252 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.65■□□□□ 0.58
ATXN3P54252 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3P54252 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.64■□□□□ 0.58
ATXN3P54252 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATXN3P54252 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATXN3P54252 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
ATXN3P54252 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATXN3P54252 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ATXN3P54252 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATXN3P54252 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.64■□□□□ 0.57
ATXN3P54252 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ATXN3P54252 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ATXN3P54252 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.64■□□□□ 0.57
ATXN3P54252 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.64■□□□□ 0.57
ATXN3P54252 AP002414.4-201ENST00000589764 1148 ntBASIC18.64■□□□□ 0.57
ATXN3P54252 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.64■□□□□ 0.57
ATXN3P54252 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.64■□□□□ 0.57
ATXN3P54252 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ATXN3P54252 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.64■□□□□ 0.57
ATXN3P54252 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 AC016734.2-201ENST00000624325 1377 ntBASIC18.64■□□□□ 0.57
ATXN3P54252 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.64■□□□□ 0.57
ATXN3P54252 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.64■□□□□ 0.57
ATXN3P54252 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ATXN3P54252 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3P54252 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.63■□□□□ 0.57
ATXN3P54252 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
ATXN3P54252 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATXN3P54252 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 NUS1P1-201ENST00000446295 882 ntBASIC18.63■□□□□ 0.57
ATXN3P54252 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.63■□□□□ 0.57
ATXN3P54252 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 AL390961.4-201ENST00000623958 2535 ntBASIC18.63■□□□□ 0.57
ATXN3P54252 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.63■□□□□ 0.57
ATXN3P54252 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATXN3P54252 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
ATXN3P54252 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms