Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TM4SF4P48230 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
TM4SF4P48230 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.76■□□□□ 0.91
TM4SF4P48230 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF4P48230 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF4P48230 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF4P48230 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.76■□□□□ 0.91
TM4SF4P48230 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF4P48230 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF4P48230 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.76■□□□□ 0.91
TM4SF4P48230 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.76■□□□□ 0.91
TM4SF4P48230 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF4P48230 AC004817.3-201ENST00000602957 2129 ntBASIC20.76■□□□□ 0.91
TM4SF4P48230 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF4P48230 AC007375.3-201ENST00000600936 2314 ntBASIC20.76■□□□□ 0.91
TM4SF4P48230 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.75■□□□□ 0.91
TM4SF4P48230 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.75■□□□□ 0.91
TM4SF4P48230 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.75■□□□□ 0.91
TM4SF4P48230 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
TM4SF4P48230 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.75■□□□□ 0.91
TM4SF4P48230 AC007967.3-201ENST00000434308 558 ntBASIC20.75■□□□□ 0.91
TM4SF4P48230 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.75■□□□□ 0.91
TM4SF4P48230 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.75■□□□□ 0.91
TM4SF4P48230 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.75■□□□□ 0.91
TM4SF4P48230 AL031432.2-201ENST00000566714 459 ntBASIC20.75■□□□□ 0.91
TM4SF4P48230 AC018845.2-201ENST00000568326 409 ntBASIC20.75■□□□□ 0.91
TM4SF4P48230 AL928711.1-201ENST00000570165 459 ntBASIC20.75■□□□□ 0.91
TM4SF4P48230 AL589182.2-201ENST00000619332 1049 ntBASIC20.75■□□□□ 0.91
TM4SF4P48230 AD001527.2-201ENST00000622994 785 ntBASIC20.75■□□□□ 0.91
TM4SF4P48230 AC093028.1-201ENST00000622998 982 ntBASIC20.75■□□□□ 0.91
TM4SF4P48230 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.75■□□□□ 0.91
TM4SF4P48230 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF4P48230 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
TM4SF4P48230 GPR89P-201ENST00000407924 1495 ntBASIC20.75■□□□□ 0.91
TM4SF4P48230 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TM4SF4P48230 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.74■□□□□ 0.91
TM4SF4P48230 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF4P48230 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF4P48230 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF4P48230 AL139400.1-201ENST00000366220 510 ntBASIC20.74■□□□□ 0.91
TM4SF4P48230 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF4P48230 TSEN15P1-201ENST00000423257 515 ntBASIC20.74■□□□□ 0.91
TM4SF4P48230 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.74■□□□□ 0.91
TM4SF4P48230 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.74■□□□□ 0.91
TM4SF4P48230 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.74■□□□□ 0.91
TM4SF4P48230 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.74■□□□□ 0.91
TM4SF4P48230 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.74■□□□□ 0.91
TM4SF4P48230 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.74■□□□□ 0.91
TM4SF4P48230 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.74■□□□□ 0.91
TM4SF4P48230 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.74■□□□□ 0.91
TM4SF4P48230 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.74■□□□□ 0.91
TM4SF4P48230 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF4P48230 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF4P48230 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.74■□□□□ 0.91
TM4SF4P48230 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.74■□□□□ 0.91
TM4SF4P48230 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF4P48230 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF4P48230 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TM4SF4P48230 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF4P48230 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.73■□□□□ 0.91
TM4SF4P48230 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF4P48230 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TM4SF4P48230 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF4P48230 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF4P48230 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.73■□□□□ 0.91
TM4SF4P48230 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF4P48230 PRSS29P-201ENST00000440800 595 ntBASIC20.73■□□□□ 0.91
TM4SF4P48230 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TM4SF4P48230 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.73■□□□□ 0.91
TM4SF4P48230 AC004706.3-202ENST00000621574 984 ntBASIC20.73■□□□□ 0.91
TM4SF4P48230 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF4P48230 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.73■□□□□ 0.91
TM4SF4P48230 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF4P48230 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF4P48230 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
TM4SF4P48230 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF4P48230 AC112907.3-201ENST00000577781 2400 ntBASIC20.73■□□□□ 0.91
TM4SF4P48230 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.72■□□□□ 0.91
TM4SF4P48230 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF4P48230 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.72■□□□□ 0.91
TM4SF4P48230 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TM4SF4P48230 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF4P48230 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF4P48230 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF4P48230 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF4P48230 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
TM4SF4P48230 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.72■□□□□ 0.91
TM4SF4P48230 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms