Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.52■□□□□ 0.56
HADHAP40939 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 AC112497.1-201ENST00000624824 639 ntBASIC18.52■□□□□ 0.56
HADHAP40939 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.52■□□□□ 0.56
HADHAP40939 AC097493.4-201ENST00000641197 219 ntBASIC18.52■□□□□ 0.56
HADHAP40939 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
HADHAP40939 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HADHAP40939 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HADHAP40939 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.52■□□□□ 0.56
HADHAP40939 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HADHAP40939 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HADHAP40939 AC068880.1-201ENST00000507289 2297 ntBASIC18.52■□□□□ 0.55
HADHAP40939 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HADHAP40939 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.51■□□□□ 0.55
HADHAP40939 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
HADHAP40939 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
HADHAP40939 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.51■□□□□ 0.55
HADHAP40939 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.51■□□□□ 0.55
HADHAP40939 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
HADHAP40939 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.51■□□□□ 0.55
HADHAP40939 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HADHAP40939 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.51■□□□□ 0.55
HADHAP40939 SLC25A3P1-201ENST00000443844 931 ntBASIC18.51■□□□□ 0.55
HADHAP40939 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.51■□□□□ 0.55
HADHAP40939 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 AC012306.2-201ENST00000609350 630 ntBASIC18.51■□□□□ 0.55
HADHAP40939 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
HADHAP40939 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.51■□□□□ 0.55
HADHAP40939 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HADHAP40939 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.51■□□□□ 0.55
HADHAP40939 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
HADHAP40939 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.51■□□□□ 0.55
HADHAP40939 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HADHAP40939 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 AC135776.1-201ENST00000319817 2481 ntBASIC18.5■□□□□ 0.55
HADHAP40939 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.5■□□□□ 0.55
HADHAP40939 AC093677.2-201ENST00000600169 1863 ntBASIC18.5■□□□□ 0.55
HADHAP40939 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
HADHAP40939 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.5■□□□□ 0.55
HADHAP40939 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
HADHAP40939 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.5■□□□□ 0.55
HADHAP40939 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.5■□□□□ 0.55
HADHAP40939 AC009065.1-201ENST00000564055 1225 ntBASIC18.5■□□□□ 0.55
HADHAP40939 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.5■□□□□ 0.55
HADHAP40939 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HADHAP40939 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.5■□□□□ 0.55
HADHAP40939 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HADHAP40939 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.5■□□□□ 0.55
HADHAP40939 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HADHAP40939 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.5■□□□□ 0.55
HADHAP40939 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HADHAP40939 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HADHAP40939 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.49■□□□□ 0.55
HADHAP40939 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HADHAP40939 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.49■□□□□ 0.55
HADHAP40939 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms