Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RFC5P40937 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC5P40937 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC5P40937 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC5P40937 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC5P40937 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC5P40937 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC5P40937 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RFC5P40937 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC5P40937 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.13■□□□□ 0.81
RFC5P40937 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC5P40937 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFC5P40937 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.13■□□□□ 0.81
RFC5P40937 AC124864.1-201ENST00000623408 392 ntBASIC20.13■□□□□ 0.81
RFC5P40937 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFC5P40937 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC5P40937 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC5P40937 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC5P40937 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
RFC5P40937 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC5P40937 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFC5P40937 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.13■□□□□ 0.81
RFC5P40937 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.13■□□□□ 0.81
RFC5P40937 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC5P40937 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RFC5P40937 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.12■□□□□ 0.81
RFC5P40937 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFC5P40937 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RFC5P40937 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.12■□□□□ 0.81
RFC5P40937 AL138781.2-201ENST00000617896 1843 ntBASIC20.12■□□□□ 0.81
RFC5P40937 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC5P40937 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
RFC5P40937 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.12■□□□□ 0.81
RFC5P40937 TSPY12P-201ENST00000421279 868 ntBASIC20.12■□□□□ 0.81
RFC5P40937 LINC00265-3P-201ENST00000447588 903 ntBASIC20.12■□□□□ 0.81
RFC5P40937 MIR3652-201ENST00000579335 131 ntBASIC20.12■□□□□ 0.81
RFC5P40937 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC5P40937 CLEC4GP1-201ENST00000596555 870 ntBASIC20.12■□□□□ 0.81
RFC5P40937 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC5P40937 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC5P40937 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC5P40937 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RFC5P40937 ESPNP-201ENST00000270691 2015 ntBASIC20.11■□□□□ 0.81
RFC5P40937 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC5P40937 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.11■□□□□ 0.81
RFC5P40937 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC5P40937 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFC5P40937 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.11■□□□□ 0.81
RFC5P40937 TOB2P1-201ENST00000469761 992 ntBASIC20.11■□□□□ 0.81
RFC5P40937 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.11■□□□□ 0.81
RFC5P40937 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 WIZP1-201ENST00000531444 2299 ntBASIC20.11■□□□□ 0.81
RFC5P40937 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 LETM1P2-201ENST00000597330 2178 ntBASIC20.11■□□□□ 0.81
RFC5P40937 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFC5P40937 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFC5P40937 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.1■□□□□ 0.81
RFC5P40937 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFC5P40937 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.1■□□□□ 0.81
RFC5P40937 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.1■□□□□ 0.81
RFC5P40937 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.1■□□□□ 0.81
RFC5P40937 AC009154.2-201ENST00000621177 724 ntBASIC20.1■□□□□ 0.81
RFC5P40937 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RFC5P40937 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFC5P40937 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 LINC00167-201ENST00000530583 1419 ntBASIC20.1■□□□□ 0.81
RFC5P40937 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms