Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB4AP20338 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 AC027612.3-201ENST00000413684 1047 ntBASIC14.04□□□□□ -0.16
RAB4AP20338 SLC25A6P5-201ENST00000435663 894 ntBASIC14.04□□□□□ -0.16
RAB4AP20338 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB4AP20338 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB4AP20338 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB4AP20338 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RAB4AP20338 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAB4AP20338 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB4AP20338 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB4AP20338 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
RAB4AP20338 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB4AP20338 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB4AP20338 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB4AP20338 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB4AP20338 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
RAB4AP20338 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.03□□□□□ -0.16
RAB4AP20338 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB4AP20338 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB4AP20338 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB4AP20338 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB4AP20338 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB4AP20338 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB4AP20338 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
RAB4AP20338 TERF1P2-201ENST00000583350 1212 ntBASIC14.03□□□□□ -0.16
RAB4AP20338 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB4AP20338 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB4AP20338 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB4AP20338 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB4AP20338 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB4AP20338 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAB4AP20338 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB4AP20338 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB4AP20338 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB4AP20338 NORAD-201ENST00000565493 5339 ntBASIC14.03□□□□□ -0.16
RAB4AP20338 TSPY26P-202ENST00000565928 3884 ntBASIC14.02□□□□□ -0.16
RAB4AP20338 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
RAB4AP20338 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB4AP20338 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB4AP20338 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB4AP20338 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB4AP20338 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB4AP20338 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB4AP20338 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB4AP20338 IRX1P1-201ENST00000438849 1838 ntBASIC14.02□□□□□ -0.16
RAB4AP20338 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RAB4AP20338 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB4AP20338 ZNF815P-204ENST00000434898 1737 ntBASIC14.02□□□□□ -0.16
RAB4AP20338 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB4AP20338 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB4AP20338 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
RAB4AP20338 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB4AP20338 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB4AP20338 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB4AP20338 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
RAB4AP20338 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB4AP20338 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 AL031432.3-201ENST00000607698 485 ntBASIC14.02□□□□□ -0.17
RAB4AP20338 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
RAB4AP20338 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RAB4AP20338 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RAB4AP20338 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms