Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT4P19013 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KRT4P19013 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT4P19013 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
KRT4P19013 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT4P19013 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.37■□□□□ 0.53
KRT4P19013 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT4P19013 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
KRT4P19013 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT4P19013 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
KRT4P19013 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KRT4P19013 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KRT4P19013 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 AC141586.5-201ENST00000624546 2050 ntBASIC18.37■□□□□ 0.53
KRT4P19013 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
KRT4P19013 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT4P19013 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT4P19013 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT4P19013 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KRT4P19013 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT4P19013 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT4P19013 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT4P19013 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
KRT4P19013 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
KRT4P19013 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KRT4P19013 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.36■□□□□ 0.53
KRT4P19013 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.36■□□□□ 0.53
KRT4P19013 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT4P19013 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT4P19013 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT4P19013 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT4P19013 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.36■□□□□ 0.53
KRT4P19013 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT4P19013 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT4P19013 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT4P19013 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
KRT4P19013 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT4P19013 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT4P19013 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT4P19013 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT4P19013 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT4P19013 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT4P19013 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 MIR564-202ENST00000385049 94 ntBASIC18.35■□□□□ 0.53
KRT4P19013 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT4P19013 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT4P19013 RPS2P4-201ENST00000476944 856 ntBASIC18.35■□□□□ 0.53
KRT4P19013 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
KRT4P19013 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT4P19013 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT4P19013 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT4P19013 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT4P19013 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT4P19013 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
KRT4P19013 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT4P19013 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT4P19013 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT4P19013 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT4P19013 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT4P19013 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KRT4P19013 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms