Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 AC092597.1-201ENST00000487352 616 ntBASIC20.15■□□□□ 0.82
GAP43P17677 KRT89P-201ENST00000620027 1478 ntBASIC20.15■□□□□ 0.82
GAP43P17677 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAP43P17677 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAP43P17677 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAP43P17677 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
GAP43P17677 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GAP43P17677 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAP43P17677 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.15■□□□□ 0.82
GAP43P17677 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.15■□□□□ 0.82
GAP43P17677 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
GAP43P17677 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.82
GAP43P17677 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GAP43P17677 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.14■□□□□ 0.82
GAP43P17677 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
GAP43P17677 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.14■□□□□ 0.81
GAP43P17677 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
GAP43P17677 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.14■□□□□ 0.81
GAP43P17677 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.14■□□□□ 0.81
GAP43P17677 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.14■□□□□ 0.81
GAP43P17677 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.14■□□□□ 0.81
GAP43P17677 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.14■□□□□ 0.81
GAP43P17677 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.14■□□□□ 0.81
GAP43P17677 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GAP43P17677 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.13■□□□□ 0.81
GAP43P17677 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.13■□□□□ 0.81
GAP43P17677 HBZP1-201ENST00000354915 429 ntBASIC20.13■□□□□ 0.81
GAP43P17677 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.13■□□□□ 0.81
GAP43P17677 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.13■□□□□ 0.81
GAP43P17677 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
GAP43P17677 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.13■□□□□ 0.81
GAP43P17677 AC112907.2-201ENST00000448639 330 ntBASIC20.13■□□□□ 0.81
GAP43P17677 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.13■□□□□ 0.81
GAP43P17677 AC113404.2-201ENST00000507884 177 ntBASIC20.13■□□□□ 0.81
GAP43P17677 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.13■□□□□ 0.81
GAP43P17677 HYMAI.1-201ENST00000620949 238 ntBASIC20.13■□□□□ 0.81
GAP43P17677 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAP43P17677 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.12■□□□□ 0.81
GAP43P17677 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
GAP43P17677 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.12■□□□□ 0.81
GAP43P17677 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.12■□□□□ 0.81
GAP43P17677 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.12■□□□□ 0.81
GAP43P17677 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.12■□□□□ 0.81
GAP43P17677 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.12■□□□□ 0.81
GAP43P17677 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
GAP43P17677 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.12■□□□□ 0.81
GAP43P17677 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.12■□□□□ 0.81
GAP43P17677 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
GAP43P17677 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
GAP43P17677 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GAP43P17677 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GAP43P17677 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
GAP43P17677 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GAP43P17677 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
GAP43P17677 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GAP43P17677 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms