Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC130P13994 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC130P13994 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC130P13994 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC130P13994 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC130P13994 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC130P13994 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC130P13994 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC130P13994 AC005332.3-201ENST00000589904 676 ntBASIC19.34■□□□□ 0.69
CCDC130P13994 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC130P13994 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.34■□□□□ 0.69
CCDC130P13994 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC130P13994 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC130P13994 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC130P13994 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC130P13994 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC130P13994 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC130P13994 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC130P13994 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC130P13994 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC130P13994 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC130P13994 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CCDC130P13994 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC130P13994 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC130P13994 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC130P13994 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC130P13994 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC130P13994 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCDC130P13994 AC090164.3-201ENST00000610780 2143 ntBASIC19.33■□□□□ 0.69
CCDC130P13994 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC130P13994 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC130P13994 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC130P13994 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC130P13994 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 IGHGP-201ENST00000390555 1178 ntBASIC19.33■□□□□ 0.68
CCDC130P13994 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC130P13994 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC130P13994 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC130P13994 AL390719.2-201ENST00000606993 987 ntBASIC19.33■□□□□ 0.68
CCDC130P13994 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC130P13994 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC130P13994 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC130P13994 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC130P13994 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC130P13994 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC130P13994 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC130P13994 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CCDC130P13994 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC130P13994 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC130P13994 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC130P13994 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC130P13994 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC130P13994 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC130P13994 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC130P13994 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC130P13994 AC093458.2-201ENST00000623150 629 ntBASIC19.32■□□□□ 0.68
CCDC130P13994 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC130P13994 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC130P13994 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC130P13994 AC020763.4-201ENST00000623414 4170 ntBASIC19.32■□□□□ 0.68
CCDC130P13994 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC130P13994 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms