Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AP001412.1-201ENST00000608405 714 ntBASIC14.9□□□□□ -0.02
DEFA4P12838 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.9□□□□□ -0.02
DEFA4P12838 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.9□□□□□ -0.02
DEFA4P12838 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.9□□□□□ -0.02
DEFA4P12838 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.9□□□□□ -0.02
DEFA4P12838 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
DEFA4P12838 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
DEFA4P12838 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
DEFA4P12838 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.9□□□□□ -0.02
DEFA4P12838 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.9□□□□□ -0.02
DEFA4P12838 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.9□□□□□ -0.02
DEFA4P12838 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
DEFA4P12838 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
DEFA4P12838 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.89□□□□□ -0.03
DEFA4P12838 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.89□□□□□ -0.03
DEFA4P12838 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
DEFA4P12838 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
DEFA4P12838 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 AC020916.1-201ENST00000587762 1774 ntBASIC14.89□□□□□ -0.03
DEFA4P12838 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
DEFA4P12838 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.89□□□□□ -0.03
DEFA4P12838 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
DEFA4P12838 FAM207BP-201ENST00000447172 505 ntBASIC14.89□□□□□ -0.03
DEFA4P12838 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.89□□□□□ -0.03
DEFA4P12838 AC091390.4-202ENST00000476426 537 ntBASIC14.89□□□□□ -0.03
DEFA4P12838 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.89□□□□□ -0.03
DEFA4P12838 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.89□□□□□ -0.03
DEFA4P12838 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.89□□□□□ -0.03
DEFA4P12838 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.89□□□□□ -0.03
DEFA4P12838 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
DEFA4P12838 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
DEFA4P12838 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
DEFA4P12838 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
DEFA4P12838 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.89□□□□□ -0.03
DEFA4P12838 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DEFA4P12838 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.88□□□□□ -0.03
DEFA4P12838 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.88□□□□□ -0.03
DEFA4P12838 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.88□□□□□ -0.03
DEFA4P12838 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
DEFA4P12838 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.88□□□□□ -0.03
DEFA4P12838 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.88□□□□□ -0.03
DEFA4P12838 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.88□□□□□ -0.03
DEFA4P12838 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
DEFA4P12838 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.88□□□□□ -0.03
DEFA4P12838 UBE2SP1-201ENST00000450587 669 ntBASIC14.88□□□□□ -0.03
DEFA4P12838 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.88□□□□□ -0.03
DEFA4P12838 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
DEFA4P12838 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.88□□□□□ -0.03
DEFA4P12838 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.88□□□□□ -0.03
DEFA4P12838 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.88□□□□□ -0.03
DEFA4P12838 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DEFA4P12838 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
DEFA4P12838 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
DEFA4P12838 FSCN1P1-201ENST00000568912 1481 ntBASIC14.88□□□□□ -0.03
DEFA4P12838 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.88□□□□□ -0.03
DEFA4P12838 AC008764.6-201ENST00000595909 2069 ntBASIC14.88□□□□□ -0.03
DEFA4P12838 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
DEFA4P12838 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms