Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.1■□□□□ 0.33
TPRP12270 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPRP12270 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.09■□□□□ 0.33
TPRP12270 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TPRP12270 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.09■□□□□ 0.33
TPRP12270 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPRP12270 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.09■□□□□ 0.33
TPRP12270 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.09■□□□□ 0.33
TPRP12270 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.09■□□□□ 0.33
TPRP12270 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.09■□□□□ 0.33
TPRP12270 AL132655.2-201ENST00000596276 594 ntBASIC17.09■□□□□ 0.33
TPRP12270 FEM1AP4-201ENST00000443167 1987 ntBASIC17.09■□□□□ 0.33
TPRP12270 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPRP12270 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPRP12270 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TPRP12270 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TPRP12270 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPRP12270 AL691432.2-201ENST00000607222 2038 ntBASIC17.09■□□□□ 0.33
TPRP12270 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.09■□□□□ 0.33
TPRP12270 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPRP12270 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPRP12270 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPRP12270 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPRP12270 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
TPRP12270 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TPRP12270 AC099343.3-201ENST00000605834 2503 ntBASIC17.09■□□□□ 0.33
TPRP12270 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPRP12270 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TPRP12270 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TPRP12270 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPRP12270 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.08■□□□□ 0.33
TPRP12270 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TPRP12270 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TPRP12270 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPRP12270 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.08■□□□□ 0.33
TPRP12270 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.08■□□□□ 0.33
TPRP12270 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TPRP12270 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TPRP12270 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.08■□□□□ 0.33
TPRP12270 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TPRP12270 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TPRP12270 DUX4L27-201ENST00000554796 1261 ntBASIC17.08■□□□□ 0.33
TPRP12270 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TPRP12270 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TPRP12270 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TPRP12270 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPRP12270 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPRP12270 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPRP12270 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPRP12270 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPRP12270 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.08■□□□□ 0.32
TPRP12270 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
TPRP12270 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPRP12270 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPRP12270 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPRP12270 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.08■□□□□ 0.32
TPRP12270 AC051619.7-201ENST00000568314 623 ntBASIC17.08■□□□□ 0.32
TPRP12270 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
TPRP12270 AC116407.2-201ENST00000613639 860 ntBASIC17.08■□□□□ 0.32
TPRP12270 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPRP12270 AC105339.1-204ENST00000636249 355 ntBASIC17.08■□□□□ 0.32
TPRP12270 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.07■□□□□ 0.32
TPRP12270 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.07■□□□□ 0.32
TPRP12270 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TPRP12270 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TPRP12270 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.07■□□□□ 0.32
TPRP12270 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.07■□□□□ 0.32
TPRP12270 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.07■□□□□ 0.32
TPRP12270 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.07■□□□□ 0.32
TPRP12270 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.07■□□□□ 0.32
TPRP12270 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TPRP12270 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.07■□□□□ 0.32
TPRP12270 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.07■□□□□ 0.32
TPRP12270 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TPRP12270 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.07■□□□□ 0.32
TPRP12270 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.07■□□□□ 0.32
TPRP12270 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.07■□□□□ 0.32
TPRP12270 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPRP12270 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.07■□□□□ 0.32
TPRP12270 AC022145.2-201ENST00000598203 171 ntBASIC17.07■□□□□ 0.32
TPRP12270 AL353135.1-201ENST00000606729 504 ntBASIC17.07■□□□□ 0.32
TPRP12270 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.07■□□□□ 0.32
TPRP12270 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.07■□□□□ 0.32
TPRP12270 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms