Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 AL645608.8-201ENST00000606034 2086 ntBASIC15.68■□□□□ 0.1
VSIG8P0DPA2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 SIRPAP1-201ENST00000448467 1770 ntBASIC15.68■□□□□ 0.1
VSIG8P0DPA2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 AC142381.4-202ENST00000563973 229 ntBASIC15.68■□□□□ 0.1
VSIG8P0DPA2 AF186192.3-201ENST00000583427 947 ntBASIC15.68■□□□□ 0.1
VSIG8P0DPA2 AC073195.1-201ENST00000607241 877 ntBASIC15.68■□□□□ 0.1
VSIG8P0DPA2 AP000692.2-201ENST00000608391 879 ntBASIC15.68■□□□□ 0.1
VSIG8P0DPA2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSIG8P0DPA2 PRORSD1P-202ENST00000563365 2154 ntBASIC15.68■□□□□ 0.1
VSIG8P0DPA2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 MESTP1-201ENST00000404287 994 ntBASIC15.67■□□□□ 0.1
VSIG8P0DPA2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSIG8P0DPA2 SDHAP2-201ENST00000455183 2001 ntBASIC15.67■□□□□ 0.1
VSIG8P0DPA2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 AC006116.8-202ENST00000587620 1550 ntBASIC15.66■□□□□ 0.1
VSIG8P0DPA2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 AC006058.3-201ENST00000606217 1069 ntBASIC15.66■□□□□ 0.1
VSIG8P0DPA2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VSIG8P0DPA2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSIG8P0DPA2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms