Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FREM3P0C091 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FREM3P0C091 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 AL133373.2-201ENST00000623187 2828 ntBASIC16.59■□□□□ 0.25
FREM3P0C091 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.59■□□□□ 0.25
FREM3P0C091 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
FREM3P0C091 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.59■□□□□ 0.25
FREM3P0C091 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 AC018470.1-201ENST00000624790 3129 ntBASIC16.59■□□□□ 0.25
FREM3P0C091 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
FREM3P0C091 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 AIRN-201ENST00000601203 4374 ntBASIC16.59■□□□□ 0.25
FREM3P0C091 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
FREM3P0C091 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
FREM3P0C091 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.59■□□□□ 0.25
FREM3P0C091 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.59■□□□□ 0.25
FREM3P0C091 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
FREM3P0C091 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.59■□□□□ 0.25
FREM3P0C091 AL163051.1-201ENST00000569214 1512 ntBASIC16.59■□□□□ 0.25
FREM3P0C091 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
FREM3P0C091 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.59■□□□□ 0.25
FREM3P0C091 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
FREM3P0C091 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
FREM3P0C091 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FREM3P0C091 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FREM3P0C091 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FREM3P0C091 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FREM3P0C091 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FREM3P0C091 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FREM3P0C091 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.58■□□□□ 0.25
FREM3P0C091 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.58■□□□□ 0.25
FREM3P0C091 AC074051.2-201ENST00000565115 352 ntBASIC16.58■□□□□ 0.25
FREM3P0C091 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.58■□□□□ 0.25
FREM3P0C091 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
FREM3P0C091 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FREM3P0C091 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.58■□□□□ 0.25
FREM3P0C091 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
FREM3P0C091 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
FREM3P0C091 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
FREM3P0C091 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.58■□□□□ 0.24
FREM3P0C091 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.58■□□□□ 0.24
FREM3P0C091 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FREM3P0C091 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.58■□□□□ 0.24
FREM3P0C091 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.58■□□□□ 0.24
FREM3P0C091 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.58■□□□□ 0.24
FREM3P0C091 AC009065.1-201ENST00000564055 1225 ntBASIC16.58■□□□□ 0.24
FREM3P0C091 AL732292.2-201ENST00000609649 430 ntBASIC16.58■□□□□ 0.24
FREM3P0C091 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.58■□□□□ 0.24
FREM3P0C091 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM3P0C091 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.58■□□□□ 0.24
FREM3P0C091 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM3P0C091 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
FREM3P0C091 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM3P0C091 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.58■□□□□ 0.24
FREM3P0C091 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FREM3P0C091 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FREM3P0C091 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.57■□□□□ 0.24
FREM3P0C091 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
FREM3P0C091 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
FREM3P0C091 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.57■□□□□ 0.24
FREM3P0C091 AC135050.7-201ENST00000624508 2218 ntBASIC16.57■□□□□ 0.24
FREM3P0C091 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
FREM3P0C091 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 ATP5G2P1-201ENST00000433580 426 ntBASIC16.57■□□□□ 0.24
FREM3P0C091 AC091607.1-201ENST00000490318 1060 ntBASIC16.57■□□□□ 0.24
FREM3P0C091 AC113404.2-201ENST00000507884 177 ntBASIC16.57■□□□□ 0.24
FREM3P0C091 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FREM3P0C091 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.57■□□□□ 0.24
FREM3P0C091 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FREM3P0C091 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.57■□□□□ 0.24
FREM3P0C091 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.57■□□□□ 0.24
FREM3P0C091 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
FREM3P0C091 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms