Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
SRPRAP08240 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRPRAP08240 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SRPRAP08240 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.41■□□□□ 0.54
SRPRAP08240 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.41■□□□□ 0.54
SRPRAP08240 NSUN5P1-202ENST00000421140 1535 ntBASIC18.41■□□□□ 0.54
SRPRAP08240 NSUN5P2-203ENST00000457352 1529 ntBASIC18.41■□□□□ 0.54
SRPRAP08240 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.41■□□□□ 0.54
SRPRAP08240 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SRPRAP08240 FOSL1P1-201ENST00000511041 816 ntBASIC18.41■□□□□ 0.54
SRPRAP08240 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 AC091304.2-201ENST00000564639 760 ntBASIC18.41■□□□□ 0.54
SRPRAP08240 AC099336.1-202ENST00000602961 463 ntBASIC18.41■□□□□ 0.54
SRPRAP08240 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SRPRAP08240 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SRPRAP08240 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SRPRAP08240 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRPRAP08240 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.4■□□□□ 0.54
SRPRAP08240 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SRPRAP08240 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.4■□□□□ 0.54
SRPRAP08240 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SRPRAP08240 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.4■□□□□ 0.54
SRPRAP08240 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.4■□□□□ 0.54
SRPRAP08240 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.4■□□□□ 0.54
SRPRAP08240 AC068472.1-201ENST00000474589 881 ntBASIC18.4■□□□□ 0.54
SRPRAP08240 KRT18P31-201ENST00000506277 1292 ntBASIC18.4■□□□□ 0.54
SRPRAP08240 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.4■□□□□ 0.54
SRPRAP08240 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.4■□□□□ 0.54
SRPRAP08240 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.4■□□□□ 0.54
SRPRAP08240 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.4■□□□□ 0.54
SRPRAP08240 AP005901.3-202ENST00000581653 237 ntBASIC18.4■□□□□ 0.54
SRPRAP08240 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SRPRAP08240 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.4■□□□□ 0.54
SRPRAP08240 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRPRAP08240 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
SRPRAP08240 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.4■□□□□ 0.54
SRPRAP08240 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.4■□□□□ 0.54
SRPRAP08240 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.39■□□□□ 0.54
SRPRAP08240 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SRPRAP08240 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SRPRAP08240 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 AC004870.1-201ENST00000315132 882 ntBASIC18.39■□□□□ 0.53
SRPRAP08240 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SRPRAP08240 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SRPRAP08240 KRT18P65-201ENST00000439811 1286 ntBASIC18.39■□□□□ 0.53
SRPRAP08240 RN7SL510P-201ENST00000581311 263 ntBASIC18.39■□□□□ 0.53
SRPRAP08240 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.39■□□□□ 0.53
SRPRAP08240 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 LINC01711-201ENST00000598340 967 ntBASIC18.39■□□□□ 0.53
SRPRAP08240 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SRPRAP08240 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.39■□□□□ 0.53
SRPRAP08240 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.39■□□□□ 0.53
SRPRAP08240 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.39■□□□□ 0.53
SRPRAP08240 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 AC005082.1-201ENST00000413042 2259 ntBASIC18.39■□□□□ 0.53
SRPRAP08240 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SRPRAP08240 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.39■□□□□ 0.53
SRPRAP08240 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SRPRAP08240 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRPRAP08240 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.39■□□□□ 0.53
SRPRAP08240 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
SRPRAP08240 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SRPRAP08240 LINC00602-201ENST00000629776 2065 ntBASIC18.38■□□□□ 0.53
SRPRAP08240 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.38■□□□□ 0.53
SRPRAP08240 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.38■□□□□ 0.53
SRPRAP08240 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms