Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.27■□□□□ 0.36
MT-ND1P03886 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MT-ND1P03886 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.27■□□□□ 0.36
MT-ND1P03886 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MT-ND1P03886 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 ESRRAP1-201ENST00000400596 1257 ntBASIC17.27■□□□□ 0.36
MT-ND1P03886 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
MT-ND1P03886 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.27■□□□□ 0.36
MT-ND1P03886 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.27■□□□□ 0.36
MT-ND1P03886 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
MT-ND1P03886 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.27■□□□□ 0.36
MT-ND1P03886 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-ND1P03886 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.27■□□□□ 0.36
MT-ND1P03886 AL096828.2-201ENST00000567259 1965 ntBASIC17.27■□□□□ 0.36
MT-ND1P03886 TNRC18P3-201ENST00000441896 2691 ntBASIC17.27■□□□□ 0.35
MT-ND1P03886 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
MT-ND1P03886 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
MT-ND1P03886 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MT-ND1P03886 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MT-ND1P03886 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MT-ND1P03886 MYLKP1-201ENST00000509077 1580 ntBASIC17.27■□□□□ 0.35
MT-ND1P03886 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MT-ND1P03886 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MT-ND1P03886 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.26■□□□□ 0.35
MT-ND1P03886 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MT-ND1P03886 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.26■□□□□ 0.35
MT-ND1P03886 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.26■□□□□ 0.35
MT-ND1P03886 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.26■□□□□ 0.35
MT-ND1P03886 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.26■□□□□ 0.35
MT-ND1P03886 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.26■□□□□ 0.35
MT-ND1P03886 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.26■□□□□ 0.35
MT-ND1P03886 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.26■□□□□ 0.35
MT-ND1P03886 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.26■□□□□ 0.35
MT-ND1P03886 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.26■□□□□ 0.35
MT-ND1P03886 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MT-ND1P03886 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
MT-ND1P03886 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 FLJ13224-201ENST00000313737 1514 ntBASIC17.26■□□□□ 0.35
MT-ND1P03886 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MT-ND1P03886 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
MT-ND1P03886 AC124067.4-201ENST00000519691 2379 ntBASIC17.25■□□□□ 0.35
MT-ND1P03886 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
MT-ND1P03886 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND1P03886 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.25■□□□□ 0.35
MT-ND1P03886 KRT8P3-201ENST00000519669 1449 ntBASIC17.25■□□□□ 0.35
MT-ND1P03886 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND1P03886 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MT-ND1P03886 AC133681.1-201ENST00000465482 601 ntBASIC17.25■□□□□ 0.35
MT-ND1P03886 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.25■□□□□ 0.35
MT-ND1P03886 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.25■□□□□ 0.35
MT-ND1P03886 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.25■□□□□ 0.35
MT-ND1P03886 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.25■□□□□ 0.35
MT-ND1P03886 AC124016.1-201ENST00000609552 612 ntBASIC17.25■□□□□ 0.35
MT-ND1P03886 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.25■□□□□ 0.35
MT-ND1P03886 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MT-ND1P03886 RCC2P3-201ENST00000418112 1537 ntBASIC17.25■□□□□ 0.35
MT-ND1P03886 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MT-ND1P03886 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms