Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.65■□□□□ 0.74
HLA-DRAP01903 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.65■□□□□ 0.74
HLA-DRAP01903 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 LINC01311-201ENST00000565162 1445 ntBASIC19.65■□□□□ 0.74
HLA-DRAP01903 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DRAP01903 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DRAP01903 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DRAP01903 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
HLA-DRAP01903 AL096828.2-201ENST00000567259 1965 ntBASIC19.64■□□□□ 0.74
HLA-DRAP01903 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.64■□□□□ 0.74
HLA-DRAP01903 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DRAP01903 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DRAP01903 AL390961.4-201ENST00000623958 2535 ntBASIC19.64■□□□□ 0.74
HLA-DRAP01903 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRAP01903 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
HLA-DRAP01903 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRAP01903 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRAP01903 AL671277.2-201ENST00000458060 996 ntBASIC19.64■□□□□ 0.73
HLA-DRAP01903 VENTXP5-201ENST00000523979 775 ntBASIC19.64■□□□□ 0.73
HLA-DRAP01903 NTF6B-201ENST00000591913 560 ntBASIC19.64■□□□□ 0.73
HLA-DRAP01903 AC024563.2-201ENST00000603282 481 ntBASIC19.64■□□□□ 0.73
HLA-DRAP01903 AC083849.1-201ENST00000615227 514 ntBASIC19.64■□□□□ 0.73
HLA-DRAP01903 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DRAP01903 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRAP01903 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRAP01903 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRAP01903 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRAP01903 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DRAP01903 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRAP01903 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DRAP01903 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-DRAP01903 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DRAP01903 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.63■□□□□ 0.73
HLA-DRAP01903 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.63■□□□□ 0.73
HLA-DRAP01903 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DRAP01903 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 SPDYE13P-201ENST00000445314 798 ntBASIC19.63■□□□□ 0.73
HLA-DRAP01903 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.63■□□□□ 0.73
HLA-DRAP01903 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DRAP01903 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DRAP01903 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HLA-DRAP01903 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DRAP01903 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DRAP01903 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HLA-DRAP01903 REXO1L9P-201ENST00000604264 2108 ntBASIC19.63■□□□□ 0.73
HLA-DRAP01903 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DRAP01903 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DRAP01903 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DRAP01903 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DRAP01903 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DRAP01903 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DRAP01903 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DRAP01903 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DRAP01903 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DRAP01903 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DRAP01903 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms