Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.33■□□□□ 0.69
ZBED1O96006 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZBED1O96006 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZBED1O96006 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.33■□□□□ 0.68
ZBED1O96006 PVRIG2P-201ENST00000435460 978 ntBASIC19.33■□□□□ 0.68
ZBED1O96006 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.33■□□□□ 0.68
ZBED1O96006 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.33■□□□□ 0.68
ZBED1O96006 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.33■□□□□ 0.68
ZBED1O96006 AL136038.4-201ENST00000603606 1261 ntBASIC19.33■□□□□ 0.68
ZBED1O96006 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
ZBED1O96006 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
ZBED1O96006 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.33■□□□□ 0.68
ZBED1O96006 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.33■□□□□ 0.68
ZBED1O96006 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.33■□□□□ 0.68
ZBED1O96006 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ZBED1O96006 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ZBED1O96006 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZBED1O96006 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZBED1O96006 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.33■□□□□ 0.68
ZBED1O96006 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZBED1O96006 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZBED1O96006 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZBED1O96006 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZBED1O96006 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.32■□□□□ 0.68
ZBED1O96006 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ZBED1O96006 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.32■□□□□ 0.68
ZBED1O96006 HTR7P1-202ENST00000624664 4411 ntBASIC19.32■□□□□ 0.68
ZBED1O96006 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ZBED1O96006 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
ZBED1O96006 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.32■□□□□ 0.68
ZBED1O96006 HLA-F-220ENST00000434407 884 ntBASIC19.32■□□□□ 0.68
ZBED1O96006 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.32■□□□□ 0.68
ZBED1O96006 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.32■□□□□ 0.68
ZBED1O96006 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.32■□□□□ 0.68
ZBED1O96006 AC126763.1-201ENST00000552015 2118 ntBASIC19.32■□□□□ 0.68
ZBED1O96006 ZNF444P1-201ENST00000559497 298 ntBASIC19.32■□□□□ 0.68
ZBED1O96006 AL121956.5-201ENST00000625261 221 ntBASIC19.32■□□□□ 0.68
ZBED1O96006 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 AC009102.3-201ENST00000623118 1491 ntBASIC19.32■□□□□ 0.68
ZBED1O96006 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ZBED1O96006 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ZBED1O96006 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZBED1O96006 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZBED1O96006 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.32■□□□□ 0.68
ZBED1O96006 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.32■□□□□ 0.68
ZBED1O96006 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZBED1O96006 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.31■□□□□ 0.68
ZBED1O96006 AC099343.3-201ENST00000605834 2503 ntBASIC19.31■□□□□ 0.68
ZBED1O96006 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.31■□□□□ 0.68
ZBED1O96006 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.31■□□□□ 0.68
ZBED1O96006 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.31■□□□□ 0.68
ZBED1O96006 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.31■□□□□ 0.68
ZBED1O96006 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.31■□□□□ 0.68
ZBED1O96006 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.31■□□□□ 0.68
ZBED1O96006 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.31■□□□□ 0.68
ZBED1O96006 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ZBED1O96006 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZBED1O96006 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ZBED1O96006 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZBED1O96006 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.31■□□□□ 0.68
ZBED1O96006 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZBED1O96006 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZBED1O96006 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZBED1O96006 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZBED1O96006 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
ZBED1O96006 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.3■□□□□ 0.68
ZBED1O96006 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ZBED1O96006 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZBED1O96006 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZBED1O96006 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZBED1O96006 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ZBED1O96006 SPDYE13P-201ENST00000445314 798 ntBASIC19.3■□□□□ 0.68
ZBED1O96006 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.3■□□□□ 0.68
ZBED1O96006 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.3■□□□□ 0.68
ZBED1O96006 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms