Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.26■□□□□ 0.19
CNOT4O95628 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 AL163051.1-201ENST00000569214 1512 ntBASIC16.26■□□□□ 0.19
CNOT4O95628 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 AC026396.1-201ENST00000419388 421 ntBASIC16.26■□□□□ 0.19
CNOT4O95628 HCG4P8-203ENST00000443049 980 ntBASIC16.26■□□□□ 0.19
CNOT4O95628 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT4O95628 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT4O95628 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.26■□□□□ 0.19
CNOT4O95628 AL136038.4-201ENST00000603606 1261 ntBASIC16.26■□□□□ 0.19
CNOT4O95628 AC083849.1-201ENST00000615227 514 ntBASIC16.26■□□□□ 0.19
CNOT4O95628 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.26■□□□□ 0.19
CNOT4O95628 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.26■□□□□ 0.19
CNOT4O95628 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT4O95628 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CNOT4O95628 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT4O95628 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT4O95628 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CNOT4O95628 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.25■□□□□ 0.19
CNOT4O95628 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CNOT4O95628 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CNOT4O95628 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.25■□□□□ 0.19
CNOT4O95628 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.25■□□□□ 0.19
CNOT4O95628 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.25■□□□□ 0.19
CNOT4O95628 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
CNOT4O95628 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.25■□□□□ 0.19
CNOT4O95628 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.25■□□□□ 0.19
CNOT4O95628 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CNOT4O95628 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.25■□□□□ 0.19
CNOT4O95628 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT4O95628 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 AL391807.1-203ENST00000604392 2365 ntBASIC16.24■□□□□ 0.19
CNOT4O95628 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.24■□□□□ 0.19
CNOT4O95628 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 MIR149-201ENST00000384879 89 ntBASIC16.24■□□□□ 0.19
CNOT4O95628 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.24■□□□□ 0.19
CNOT4O95628 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.24■□□□□ 0.19
CNOT4O95628 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.24■□□□□ 0.19
CNOT4O95628 VENTXP5-201ENST00000523979 775 ntBASIC16.24■□□□□ 0.19
CNOT4O95628 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.24■□□□□ 0.19
CNOT4O95628 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.24■□□□□ 0.19
CNOT4O95628 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 MYLKP1-201ENST00000509077 1580 ntBASIC16.24■□□□□ 0.19
CNOT4O95628 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.24■□□□□ 0.19
CNOT4O95628 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.24■□□□□ 0.19
CNOT4O95628 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNOT4O95628 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CNOT4O95628 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.23■□□□□ 0.19
CNOT4O95628 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CNOT4O95628 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.23■□□□□ 0.19
CNOT4O95628 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.23■□□□□ 0.19
CNOT4O95628 KRT89P-201ENST00000620027 1478 ntBASIC16.23■□□□□ 0.19
CNOT4O95628 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.23■□□□□ 0.19
CNOT4O95628 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms