Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1BO75841 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.96■□□□□ 0.14
UPK1BO75841 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1BO75841 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1BO75841 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1BO75841 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.14
UPK1BO75841 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1BO75841 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1BO75841 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1BO75841 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1BO75841 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
UPK1BO75841 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1BO75841 FER1L4-210ENST00000615531 5998 ntBASIC15.95■□□□□ 0.14
UPK1BO75841 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
UPK1BO75841 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1BO75841 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.95■□□□□ 0.14
UPK1BO75841 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.95■□□□□ 0.14
UPK1BO75841 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.95■□□□□ 0.14
UPK1BO75841 AC027682.1-201ENST00000562846 899 ntBASIC15.95■□□□□ 0.14
UPK1BO75841 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.95■□□□□ 0.14
UPK1BO75841 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1BO75841 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
UPK1BO75841 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1BO75841 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1BO75841 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.95■□□□□ 0.14
UPK1BO75841 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1BO75841 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
UPK1BO75841 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1BO75841 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 OR6D1P-203ENST00000641209 4860 ntBASIC15.94■□□□□ 0.14
UPK1BO75841 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.94■□□□□ 0.14
UPK1BO75841 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 KRT18P68-201ENST00000392293 1000 ntBASIC15.94■□□□□ 0.14
UPK1BO75841 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1BO75841 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 AC016405.3-201ENST00000607710 860 ntBASIC15.94■□□□□ 0.14
UPK1BO75841 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
UPK1BO75841 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.94■□□□□ 0.14
UPK1BO75841 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1BO75841 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
UPK1BO75841 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.94■□□□□ 0.14
UPK1BO75841 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1BO75841 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1BO75841 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1BO75841 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
UPK1BO75841 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1BO75841 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
UPK1BO75841 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1BO75841 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1BO75841 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1BO75841 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1BO75841 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.93■□□□□ 0.14
UPK1BO75841 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1BO75841 AL162412.1-201ENST00000567129 965 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms