Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.04■□□□□ 0.64
LRCH4O75427 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.04■□□□□ 0.64
LRCH4O75427 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH4O75427 AC067852.2-201ENST00000590513 2313 ntBASIC19.04■□□□□ 0.64
LRCH4O75427 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.04■□□□□ 0.64
LRCH4O75427 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH4O75427 AL023973.1-201ENST00000624619 620 ntBASIC19.04■□□□□ 0.64
LRCH4O75427 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LRCH4O75427 AC005332.8-201ENST00000622750 2735 ntBASIC19.04■□□□□ 0.64
LRCH4O75427 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.04■□□□□ 0.64
LRCH4O75427 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH4O75427 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.04■□□□□ 0.64
LRCH4O75427 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.04■□□□□ 0.64
LRCH4O75427 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH4O75427 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH4O75427 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.04■□□□□ 0.64
LRCH4O75427 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH4O75427 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH4O75427 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LRCH4O75427 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH4O75427 AP000997.3-201ENST00000623333 2250 ntBASIC19.03■□□□□ 0.64
LRCH4O75427 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.03■□□□□ 0.64
LRCH4O75427 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.03■□□□□ 0.64
LRCH4O75427 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
LRCH4O75427 TERF1P1-201ENST00000311003 1181 ntBASIC19.03■□□□□ 0.64
LRCH4O75427 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.03■□□□□ 0.64
LRCH4O75427 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
LRCH4O75427 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRCH4O75427 AC005363.2-201ENST00000618631 242 ntBASIC19.03■□□□□ 0.64
LRCH4O75427 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH4O75427 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH4O75427 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
LRCH4O75427 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRCH4O75427 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRCH4O75427 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.03■□□□□ 0.64
LRCH4O75427 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.03■□□□□ 0.64
LRCH4O75427 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH4O75427 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH4O75427 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH4O75427 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
LRCH4O75427 AC073508.3-201ENST00000619697 1419 ntBASIC19.02■□□□□ 0.64
LRCH4O75427 LIN28AP1-201ENST00000429574 405 ntBASIC19.02■□□□□ 0.64
LRCH4O75427 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.02■□□□□ 0.64
LRCH4O75427 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.02■□□□□ 0.64
LRCH4O75427 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.02■□□□□ 0.64
LRCH4O75427 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
LRCH4O75427 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LRCH4O75427 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH4O75427 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH4O75427 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH4O75427 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH4O75427 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH4O75427 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH4O75427 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.02■□□□□ 0.64
LRCH4O75427 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.02■□□□□ 0.64
LRCH4O75427 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.02■□□□□ 0.63
LRCH4O75427 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.01■□□□□ 0.63
LRCH4O75427 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LRCH4O75427 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRCH4O75427 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LRCH4O75427 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH4O75427 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LRCH4O75427 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 PVRIG2P-201ENST00000435460 978 ntBASIC19.01■□□□□ 0.63
LRCH4O75427 ATP5G1P1-201ENST00000448724 379 ntBASIC19.01■□□□□ 0.63
LRCH4O75427 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.01■□□□□ 0.63
LRCH4O75427 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH4O75427 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRCH4O75427 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
LRCH4O75427 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
LRCH4O75427 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LRCH4O75427 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRCH4O75427 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH4O75427 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH4O75427 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH4O75427 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms