Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 AL031133.1-201ENST00000406807 723 ntBASIC19.73■□□□□ 0.75
RNF40O75150 TSPY5P-201ENST00000426936 936 ntBASIC19.73■□□□□ 0.75
RNF40O75150 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.73■□□□□ 0.75
RNF40O75150 AC092647.4-201ENST00000457211 535 ntBASIC19.73■□□□□ 0.75
RNF40O75150 COX11P1-201ENST00000489116 835 ntBASIC19.73■□□□□ 0.75
RNF40O75150 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF40O75150 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF40O75150 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF40O75150 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF40O75150 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 AC092338.2-201ENST00000568827 1415 ntBASIC19.73■□□□□ 0.75
RNF40O75150 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.73■□□□□ 0.75
RNF40O75150 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RNF40O75150 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RNF40O75150 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF40O75150 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF40O75150 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF40O75150 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF40O75150 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RNF40O75150 LINC00896-202ENST00000609602 2128 ntBASIC19.72■□□□□ 0.75
RNF40O75150 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF40O75150 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF40O75150 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF40O75150 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
RNF40O75150 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF40O75150 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF40O75150 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RNF40O75150 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
RNF40O75150 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF40O75150 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RNF40O75150 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF40O75150 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF40O75150 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF40O75150 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 AC141257.4-201ENST00000634557 245 ntBASIC19.71■□□□□ 0.75
RNF40O75150 AC136944.6-201ENST00000634818 245 ntBASIC19.71■□□□□ 0.75
RNF40O75150 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RNF40O75150 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF40O75150 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RNF40O75150 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF40O75150 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
RNF40O75150 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RNF40O75150 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RNF40O75150 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF40O75150 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF40O75150 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF40O75150 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF40O75150 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF40O75150 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF40O75150 IRX1P1-201ENST00000438849 1838 ntBASIC19.7■□□□□ 0.74
RNF40O75150 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF40O75150 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF40O75150 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF40O75150 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms