Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.69■□□□□ 0.42
GFRA3O60609 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.69■□□□□ 0.42
GFRA3O60609 LINC01521-201ENST00000504184 1943 ntBASIC17.69■□□□□ 0.42
GFRA3O60609 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GFRA3O60609 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
GFRA3O60609 AC055876.3-201ENST00000431496 288 ntBASIC17.69■□□□□ 0.42
GFRA3O60609 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.69■□□□□ 0.42
GFRA3O60609 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFRA3O60609 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.69■□□□□ 0.42
GFRA3O60609 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFRA3O60609 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.69■□□□□ 0.42
GFRA3O60609 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
GFRA3O60609 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.69■□□□□ 0.42
GFRA3O60609 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.69■□□□□ 0.42
GFRA3O60609 AC008687.5-201ENST00000593746 558 ntBASIC17.69■□□□□ 0.42
GFRA3O60609 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFRA3O60609 AC138649.4-201ENST00000612222 287 ntBASIC17.69■□□□□ 0.42
GFRA3O60609 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFRA3O60609 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
GFRA3O60609 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GFRA3O60609 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GFRA3O60609 BCAR1-209ENST00000546196 1340 ntBASIC17.69■□□□□ 0.42
GFRA3O60609 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFRA3O60609 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.69■□□□□ 0.42
GFRA3O60609 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.69■□□□□ 0.42
GFRA3O60609 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFRA3O60609 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFRA3O60609 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GFRA3O60609 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFRA3O60609 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.68■□□□□ 0.42
GFRA3O60609 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GFRA3O60609 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GFRA3O60609 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFRA3O60609 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFRA3O60609 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFRA3O60609 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GFRA3O60609 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.68■□□□□ 0.42
GFRA3O60609 AC091812.2-201ENST00000619081 385 ntBASIC17.68■□□□□ 0.42
GFRA3O60609 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFRA3O60609 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GFRA3O60609 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFRA3O60609 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GFRA3O60609 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFRA3O60609 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFRA3O60609 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFRA3O60609 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFRA3O60609 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFRA3O60609 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GFRA3O60609 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.67■□□□□ 0.42
GFRA3O60609 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GFRA3O60609 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GFRA3O60609 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.67■□□□□ 0.42
GFRA3O60609 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
GFRA3O60609 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GFRA3O60609 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.67■□□□□ 0.42
GFRA3O60609 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.67■□□□□ 0.42
GFRA3O60609 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 FEM1AP4-201ENST00000443167 1987 ntBASIC17.66■□□□□ 0.42
GFRA3O60609 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.66■□□□□ 0.42
GFRA3O60609 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.66■□□□□ 0.42
GFRA3O60609 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 UGT1A2P-201ENST00000454886 866 ntBASIC17.66■□□□□ 0.42
GFRA3O60609 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.66■□□□□ 0.42
GFRA3O60609 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 KRT19P2-202ENST00000557173 1012 ntBASIC17.66■□□□□ 0.42
GFRA3O60609 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.66■□□□□ 0.42
GFRA3O60609 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.66■□□□□ 0.42
GFRA3O60609 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.66■□□□□ 0.42
GFRA3O60609 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.66■□□□□ 0.42
GFRA3O60609 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.66■□□□□ 0.42
GFRA3O60609 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.66■□□□□ 0.42
GFRA3O60609 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFRA3O60609 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms