Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX3O60493 AC106886.4-201ENST00000623557 2502 ntBASIC18.02■□□□□ 0.48
SNX3O60493 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX3O60493 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX3O60493 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX3O60493 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX3O60493 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SNX3O60493 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.02■□□□□ 0.48
SNX3O60493 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX3O60493 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.02■□□□□ 0.48
SNX3O60493 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.02■□□□□ 0.48
SNX3O60493 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SNX3O60493 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX3O60493 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.48
SNX3O60493 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX3O60493 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX3O60493 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX3O60493 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SNX3O60493 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.02■□□□□ 0.47
SNX3O60493 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.02■□□□□ 0.47
SNX3O60493 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SNX3O60493 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX3O60493 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.02■□□□□ 0.47
SNX3O60493 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX3O60493 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX3O60493 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.02■□□□□ 0.47
SNX3O60493 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX3O60493 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SNX3O60493 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX3O60493 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SNX3O60493 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX3O60493 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX3O60493 KRT8P11-201ENST00000409686 1436 ntBASIC18.01■□□□□ 0.47
SNX3O60493 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.01■□□□□ 0.47
SNX3O60493 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.01■□□□□ 0.47
SNX3O60493 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX3O60493 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SNX3O60493 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX3O60493 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.01■□□□□ 0.47
SNX3O60493 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.01■□□□□ 0.47
SNX3O60493 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SNX3O60493 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX3O60493 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SNX3O60493 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.01■□□□□ 0.47
SNX3O60493 RCC2P3-201ENST00000418112 1537 ntBASIC18.01■□□□□ 0.47
SNX3O60493 AL391005.1-201ENST00000623953 2435 ntBASIC18.01■□□□□ 0.47
SNX3O60493 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX3O60493 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX3O60493 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX3O60493 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18■□□□□ 0.47
SNX3O60493 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
SNX3O60493 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18■□□□□ 0.47
SNX3O60493 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SNX3O60493 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SNX3O60493 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SNX3O60493 AC016769.1-201ENST00000409132 1010 ntBASIC18■□□□□ 0.47
SNX3O60493 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18■□□□□ 0.47
SNX3O60493 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18■□□□□ 0.47
SNX3O60493 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18■□□□□ 0.47
SNX3O60493 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18■□□□□ 0.47
SNX3O60493 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18■□□□□ 0.47
SNX3O60493 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18■□□□□ 0.47
SNX3O60493 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18■□□□□ 0.47
SNX3O60493 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SNX3O60493 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SNX3O60493 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
SNX3O60493 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNX3O60493 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SNX3O60493 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.99■□□□□ 0.47
SNX3O60493 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SNX3O60493 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNX3O60493 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms