Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 AC140113.3-201ENST00000605663 199 ntBASIC16.31■□□□□ 0.2
TRAF3IP2O43734 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.31■□□□□ 0.2
TRAF3IP2O43734 AC006011.2-201ENST00000621313 1158 ntBASIC16.31■□□□□ 0.2
TRAF3IP2O43734 AC011558.1-201ENST00000623459 338 ntBASIC16.31■□□□□ 0.2
TRAF3IP2O43734 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 LINC01126-201ENST00000623515 1646 ntBASIC16.3■□□□□ 0.2
TRAF3IP2O43734 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 AC034232.1-201ENST00000506026 1064 ntBASIC16.3■□□□□ 0.2
TRAF3IP2O43734 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 PHGDH-209ENST00000641074 1780 ntBASIC16.3■□□□□ 0.2
TRAF3IP2O43734 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP2O43734 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP2O43734 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP2O43734 RCN1P1-201ENST00000400413 996 ntBASIC16.28■□□□□ 0.2
TRAF3IP2O43734 SPDYE15P-201ENST00000424157 909 ntBASIC16.28■□□□□ 0.2
TRAF3IP2O43734 PVRIG2P-201ENST00000435460 978 ntBASIC16.28■□□□□ 0.2
TRAF3IP2O43734 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms