Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.52■□□□□ 0.88
ACTN4O43707 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
ACTN4O43707 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.52■□□□□ 0.88
ACTN4O43707 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
ACTN4O43707 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ACTN4O43707 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.52■□□□□ 0.88
ACTN4O43707 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
ACTN4O43707 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ACTN4O43707 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.52■□□□□ 0.87
ACTN4O43707 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ACTN4O43707 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ACTN4O43707 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.51■□□□□ 0.87
ACTN4O43707 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.51■□□□□ 0.87
ACTN4O43707 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.51■□□□□ 0.87
ACTN4O43707 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.51■□□□□ 0.87
ACTN4O43707 AC010240.3-201ENST00000607688 395 ntBASIC20.51■□□□□ 0.87
ACTN4O43707 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.51■□□□□ 0.87
ACTN4O43707 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.51■□□□□ 0.87
ACTN4O43707 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.51■□□□□ 0.87
ACTN4O43707 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ACTN4O43707 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.51■□□□□ 0.87
ACTN4O43707 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
ACTN4O43707 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ACTN4O43707 GNAS-203ENST00000306120 1878 ntBASIC20.5■□□□□ 0.87
ACTN4O43707 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ACTN4O43707 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.5■□□□□ 0.87
ACTN4O43707 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.5■□□□□ 0.87
ACTN4O43707 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.5■□□□□ 0.87
ACTN4O43707 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.5■□□□□ 0.87
ACTN4O43707 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.5■□□□□ 0.87
ACTN4O43707 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ACTN4O43707 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.5■□□□□ 0.87
ACTN4O43707 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.5■□□□□ 0.87
ACTN4O43707 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.5■□□□□ 0.87
ACTN4O43707 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
ACTN4O43707 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ACTN4O43707 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.5■□□□□ 0.87
ACTN4O43707 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.5■□□□□ 0.87
ACTN4O43707 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.49■□□□□ 0.87
ACTN4O43707 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.49■□□□□ 0.87
ACTN4O43707 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ACTN4O43707 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ACTN4O43707 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
ACTN4O43707 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
ACTN4O43707 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ACTN4O43707 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.49■□□□□ 0.87
ACTN4O43707 AC009947.2-201ENST00000444014 672 ntBASIC20.49■□□□□ 0.87
ACTN4O43707 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.49■□□□□ 0.87
ACTN4O43707 NAPSB-206ENST00000562112 1266 ntBASIC20.49■□□□□ 0.87
ACTN4O43707 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.49■□□□□ 0.87
ACTN4O43707 LINC00896-202ENST00000609602 2128 ntBASIC20.49■□□□□ 0.87
ACTN4O43707 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ACTN4O43707 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms