Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.67■■□□□ 1.22
SRGAP3O43295 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.67■■□□□ 1.22
SRGAP3O43295 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.67■■□□□ 1.22
SRGAP3O43295 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.67■■□□□ 1.22
SRGAP3O43295 GPR32P1-201ENST00000601788 811 ntBASIC22.67■■□□□ 1.22
SRGAP3O43295 AL390719.2-201ENST00000606993 987 ntBASIC22.67■■□□□ 1.22
SRGAP3O43295 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.67■■□□□ 1.22
SRGAP3O43295 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.67■■□□□ 1.22
SRGAP3O43295 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SRGAP3O43295 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.67■■□□□ 1.22
SRGAP3O43295 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC22.67■■□□□ 1.22
SRGAP3O43295 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SRGAP3O43295 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.67■■□□□ 1.22
SRGAP3O43295 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
SRGAP3O43295 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SRGAP3O43295 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.67■■□□□ 1.22
SRGAP3O43295 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SRGAP3O43295 AC093677.2-201ENST00000600169 1863 ntBASIC22.66■■□□□ 1.22
SRGAP3O43295 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
SRGAP3O43295 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.66■■□□□ 1.22
SRGAP3O43295 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.66■■□□□ 1.22
SRGAP3O43295 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.66■■□□□ 1.22
SRGAP3O43295 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22.66■■□□□ 1.22
SRGAP3O43295 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC22.66■■□□□ 1.22
SRGAP3O43295 AC008687.5-201ENST00000593746 558 ntBASIC22.66■■□□□ 1.22
SRGAP3O43295 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.66■■□□□ 1.22
SRGAP3O43295 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.66■■□□□ 1.22
SRGAP3O43295 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SRGAP3O43295 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SRGAP3O43295 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SRGAP3O43295 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC22.65■■□□□ 1.22
SRGAP3O43295 TSPY22P-201ENST00000427496 604 ntBASIC22.65■■□□□ 1.22
SRGAP3O43295 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.65■■□□□ 1.22
SRGAP3O43295 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 AC113404.2-201ENST00000507884 177 ntBASIC22.65■■□□□ 1.22
SRGAP3O43295 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.65■■□□□ 1.22
SRGAP3O43295 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.65■■□□□ 1.22
SRGAP3O43295 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SRGAP3O43295 AC004263.2-201ENST00000617183 678 ntBASIC22.65■■□□□ 1.22
SRGAP3O43295 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.65■■□□□ 1.22
SRGAP3O43295 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.65■■□□□ 1.22
SRGAP3O43295 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SRGAP3O43295 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.65■■□□□ 1.22
SRGAP3O43295 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SRGAP3O43295 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
SRGAP3O43295 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SRGAP3O43295 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.64■■□□□ 1.22
SRGAP3O43295 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.64■■□□□ 1.22
SRGAP3O43295 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
SRGAP3O43295 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
SRGAP3O43295 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SRGAP3O43295 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SRGAP3O43295 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SRGAP3O43295 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SRGAP3O43295 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.64■■□□□ 1.21
SRGAP3O43295 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SRGAP3O43295 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SRGAP3O43295 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SRGAP3O43295 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SRGAP3O43295 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SRGAP3O43295 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
SRGAP3O43295 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SRGAP3O43295 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SRGAP3O43295 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.64■■□□□ 1.21
SRGAP3O43295 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SRGAP3O43295 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.64■■□□□ 1.21
SRGAP3O43295 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SRGAP3O43295 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.64■■□□□ 1.21
SRGAP3O43295 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.64■■□□□ 1.21
SRGAP3O43295 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SRGAP3O43295 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms