Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 AL357033.4-201ENST00000617703 1807 ntBASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 TSPY22P-201ENST00000427496 604 ntBASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 MIR3652-201ENST00000579335 131 ntBASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 AL031598.1-201ENST00000561511 1773 ntBASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NPIPA2E9PIF3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA2E9PIF3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NPIPA2E9PIF3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NPIPA2E9PIF3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 PRELID1P1-202ENST00000567272 903 ntBASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 RNF126P1-202ENST00000569893 925 ntBASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 AP002414.4-201ENST00000589764 1148 ntBASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA2E9PIF3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms