Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM3A6NNA2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SRRM3A6NNA2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM3A6NNA2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM3A6NNA2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM3A6NNA2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM3A6NNA2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.98■□□□□ 0.63
SRRM3A6NNA2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 IER3-202ENST00000376377 1350 ntBASIC18.97■□□□□ 0.63
SRRM3A6NNA2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 RNF152P1-201ENST00000397754 604 ntBASIC18.97■□□□□ 0.63
SRRM3A6NNA2 AP000347.1-202ENST00000435868 847 ntBASIC18.97■□□□□ 0.63
SRRM3A6NNA2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 EGLN1P1-201ENST00000531623 762 ntBASIC18.97■□□□□ 0.63
SRRM3A6NNA2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.97■□□□□ 0.63
SRRM3A6NNA2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SRRM3A6NNA2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 AC128688.1-201ENST00000487626 519 ntBASIC18.96■□□□□ 0.63
SRRM3A6NNA2 FAM86EP-206ENST00000510506 987 ntBASIC18.96■□□□□ 0.63
SRRM3A6NNA2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.96■□□□□ 0.63
SRRM3A6NNA2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 AD000864.1-201ENST00000624076 2295 ntBASIC18.95■□□□□ 0.62
SRRM3A6NNA2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 AC108860.2-201ENST00000562760 2183 ntBASIC18.95■□□□□ 0.62
SRRM3A6NNA2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 AC246785.2-201ENST00000432512 513 ntBASIC18.95■□□□□ 0.62
SRRM3A6NNA2 PVRIG2P-201ENST00000435460 978 ntBASIC18.95■□□□□ 0.62
SRRM3A6NNA2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 AC004264.1-201ENST00000608354 794 ntBASIC18.95■□□□□ 0.62
SRRM3A6NNA2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 AC023511.2-201ENST00000618803 211 ntBASIC18.95■□□□□ 0.62
SRRM3A6NNA2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms