Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 DUTP2-201ENST00000519164 463 ntBASIC12.9□□□□□ -0.34
LINC01546A6NGU7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 AC131212.1-201ENST00000613771 668 ntBASIC12.9□□□□□ -0.34
LINC01546A6NGU7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01546A6NGU7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01546A6NGU7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.35
LINC01546A6NGU7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.9□□□□□ -0.35
LINC01546A6NGU7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01546A6NGU7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 AC026691.1-201ENST00000602502 2017 ntBASIC12.89□□□□□ -0.35
LINC01546A6NGU7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 MIR564-202ENST00000385049 94 ntBASIC12.89□□□□□ -0.35
LINC01546A6NGU7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 AC133552.2-202ENST00000575694 574 ntBASIC12.89□□□□□ -0.35
LINC01546A6NGU7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 AC120498.8-201ENST00000614275 531 ntBASIC12.89□□□□□ -0.35
LINC01546A6NGU7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01546A6NGU7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.88□□□□□ -0.35
LINC01546A6NGU7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms