Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AL163051.1-201ENST00000569214 1512 ntBASIC17.4■□□□□ 0.38
CNOT1A5YKK6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 VN2R19P-201ENST00000442399 1052 ntBASIC17.4■□□□□ 0.38
CNOT1A5YKK6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 AC004449.1-201ENST00000564240 433 ntBASIC17.4■□□□□ 0.38
CNOT1A5YKK6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
CNOT1A5YKK6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNOT1A5YKK6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CNOT1A5YKK6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.39■□□□□ 0.38
CNOT1A5YKK6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNOT1A5YKK6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CNOT1A5YKK6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.39■□□□□ 0.38
CNOT1A5YKK6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.39■□□□□ 0.38
CNOT1A5YKK6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.39■□□□□ 0.38
CNOT1A5YKK6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 MEIS3P1-201ENST00000495167 958 ntBASIC17.39■□□□□ 0.37
CNOT1A5YKK6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CNOT1A5YKK6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 MRPL20P1-201ENST00000400819 433 ntBASIC17.38■□□□□ 0.37
CNOT1A5YKK6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 Z92544.3-201ENST00000624747 417 ntBASIC17.38■□□□□ 0.37
CNOT1A5YKK6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT1A5YKK6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 AC015922.1-201ENST00000421102 1152 ntBASIC17.37■□□□□ 0.37
CNOT1A5YKK6 PAWRP1-201ENST00000451083 565 ntBASIC17.37■□□□□ 0.37
CNOT1A5YKK6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 AC093214.1-201ENST00000511688 1107 ntBASIC17.37■□□□□ 0.37
CNOT1A5YKK6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.37■□□□□ 0.37
CNOT1A5YKK6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT1A5YKK6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms