Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 FLJ13224-201ENST00000313737 1514 ntBASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 BCL2-203ENST00000589955 5011 ntBASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 MESTP1-201ENST00000404287 994 ntBASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 REXO1L9P-201ENST00000604264 2108 ntBASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-7A0A0A0MS04 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 AL023284.2-201ENST00000405850 579 ntBASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC096733.2-201ENST00000609937 1394 ntBASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-7A0A0A0MS04 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms