Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 FAM87A-204ENST00000613235 858 ntBASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 FLJ13224-201ENST00000313737 1514 ntBASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 AC093827.2-201ENST00000512654 315 ntBASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CYP46A1Q9Y6A2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 AC067852.2-201ENST00000590513 2313 ntBASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CYP46A1Q9Y6A2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CYP46A1Q9Y6A2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.7■■□□□ 1.07
CYP46A1Q9Y6A2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
CYP46A1Q9Y6A2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 LINC01126-201ENST00000623515 1646 ntBASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 AC009947.2-201ENST00000444014 672 ntBASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 AC010240.3-201ENST00000607688 395 ntBASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CYP46A1Q9Y6A2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms