Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 AL596275.1-201ENST00000423464 877 ntBASIC20.9■□□□□ 0.94
CLIC4Q9Y696 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 ECEL1P2-202ENST00000465689 757 ntBASIC20.9■□□□□ 0.94
CLIC4Q9Y696 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 AL024508.2-201ENST00000607749 1894 ntBASIC20.9■□□□□ 0.94
CLIC4Q9Y696 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
CLIC4Q9Y696 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLIC4Q9Y696 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLIC4Q9Y696 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLIC4Q9Y696 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 MMP23A-201ENST00000234610 1017 ntBASIC20.89■□□□□ 0.93
CLIC4Q9Y696 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 FAM87A-204ENST00000613235 858 ntBASIC20.89■□□□□ 0.93
CLIC4Q9Y696 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.89■□□□□ 0.93
CLIC4Q9Y696 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 NAPSB-206ENST00000562112 1266 ntBASIC20.88■□□□□ 0.93
CLIC4Q9Y696 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIC4Q9Y696 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CLIC4Q9Y696 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIC4Q9Y696 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIC4Q9Y696 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLIC4Q9Y696 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLIC4Q9Y696 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLIC4Q9Y696 AC093010.1-201ENST00000473625 1624 ntBASIC20.87■□□□□ 0.93
CLIC4Q9Y696 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms