Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D4Q9Y2X8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D4Q9Y2X8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.77□□□□□ -0.36
UBE2D4Q9Y2X8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
UBE2D4Q9Y2X8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
UBE2D4Q9Y2X8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
UBE2D4Q9Y2X8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D4Q9Y2X8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
UBE2D4Q9Y2X8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D4Q9Y2X8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 KRASP1-201ENST00000407852 552 ntBASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 AC004951.3-201ENST00000418645 1148 ntBASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 CKBP1-201ENST00000565489 1086 ntBASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 AL109923.1-201ENST00000618799 583 ntBASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 AL023875.1-201ENST00000640777 796 ntBASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 AC009053.2-201ENST00000563701 2365 ntBASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D4Q9Y2X8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 AP003097.1-201ENST00000530657 1135 ntBASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D4Q9Y2X8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms