Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 AC091390.4-202ENST00000476426 537 ntBASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 AC026366.1-201ENST00000488803 879 ntBASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TMCC3Q9ULS5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC3Q9ULS5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 RNA5SP413-201ENST00000516373 109 ntBASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 FLJ13224-201ENST00000313737 1514 ntBASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.01■□□□□ 0.31
TMCC3Q9ULS5 LINC00896-202ENST00000609602 2128 ntBASIC17■□□□□ 0.31
TMCC3Q9ULS5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 KRT18P41-201ENST00000518924 1277 ntBASIC17■□□□□ 0.31
TMCC3Q9ULS5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 AC233263.1-201ENST00000578059 224 ntBASIC17■□□□□ 0.31
TMCC3Q9ULS5 AC110285.5-201ENST00000611501 352 ntBASIC17■□□□□ 0.31
TMCC3Q9ULS5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMCC3Q9ULS5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
TMCC3Q9ULS5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMCC3Q9ULS5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.99■□□□□ 0.31
TMCC3Q9ULS5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMCC3Q9ULS5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TMCC3Q9ULS5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMCC3Q9ULS5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.99■□□□□ 0.31
TMCC3Q9ULS5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMCC3Q9ULS5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.99■□□□□ 0.31
TMCC3Q9ULS5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TMCC3Q9ULS5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms