Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 TPSP2-201ENST00000561760 610 ntBASIC19.31■□□□□ 0.68
CDH9Q9ULB4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 AL592071.1-201ENST00000611956 408 ntBASIC19.31■□□□□ 0.68
CDH9Q9ULB4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CDH9Q9ULB4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 AC124864.1-201ENST00000623408 392 ntBASIC19.3■□□□□ 0.68
CDH9Q9ULB4 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.3■□□□□ 0.68
CDH9Q9ULB4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 ESPNP-201ENST00000270691 2015 ntBASIC19.3■□□□□ 0.68
CDH9Q9ULB4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH9Q9ULB4 AC087289.5-201ENST00000586076 3175 ntBASIC19.3■□□□□ 0.68
CDH9Q9ULB4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH9Q9ULB4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 TSPY12P-201ENST00000421279 868 ntBASIC19.28■□□□□ 0.68
CDH9Q9ULB4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH9Q9ULB4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms