Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 MFAP1P1-201ENST00000442257 1255 ntBASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 FAM207BP-201ENST00000447172 505 ntBASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 ATP5G1P1-201ENST00000448724 379 ntBASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 WWOX-216ENST00000569818 525 ntBASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 AC138028.4-201ENST00000564984 1845 ntBASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 AC134043.2-201ENST00000624206 2238 ntBASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 AC096733.2-201ENST00000609937 1394 ntBASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RABGEF1Q9UJ41 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 AC128688.1-201ENST00000487626 519 ntBASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RABGEF1Q9UJ41 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
RABGEF1Q9UJ41 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms