Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21■□□□□ 0.95
USP25Q9UHP3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21■□□□□ 0.95
USP25Q9UHP3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21■□□□□ 0.95
USP25Q9UHP3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
USP25Q9UHP3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP25Q9UHP3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
USP25Q9UHP3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21■□□□□ 0.95
USP25Q9UHP3 AL645608.8-201ENST00000606034 2086 ntBASIC21■□□□□ 0.95
USP25Q9UHP3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP25Q9UHP3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21■□□□□ 0.95
USP25Q9UHP3 PRORSD1P-201ENST00000295112 541 ntBASIC21■□□□□ 0.95
USP25Q9UHP3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP25Q9UHP3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP25Q9UHP3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21■□□□□ 0.95
USP25Q9UHP3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21■□□□□ 0.95
USP25Q9UHP3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21■□□□□ 0.95
USP25Q9UHP3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21■□□□□ 0.95
USP25Q9UHP3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21■□□□□ 0.95
USP25Q9UHP3 AC012317.2-201ENST00000623305 2251 ntBASIC21■□□□□ 0.95
USP25Q9UHP3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP25Q9UHP3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21■□□□□ 0.95
USP25Q9UHP3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP25Q9UHP3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP25Q9UHP3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
USP25Q9UHP3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
USP25Q9UHP3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
USP25Q9UHP3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.99■□□□□ 0.95
USP25Q9UHP3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.99■□□□□ 0.95
USP25Q9UHP3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 UBE2SP1-201ENST00000450587 669 ntBASIC20.99■□□□□ 0.95
USP25Q9UHP3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.99■□□□□ 0.95
USP25Q9UHP3 NUDT16P1-203ENST00000513809 620 ntBASIC20.99■□□□□ 0.95
USP25Q9UHP3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.99■□□□□ 0.95
USP25Q9UHP3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.99■□□□□ 0.95
USP25Q9UHP3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.99■□□□□ 0.95
USP25Q9UHP3 AC142381.4-202ENST00000563973 229 ntBASIC20.99■□□□□ 0.95
USP25Q9UHP3 AP001412.1-201ENST00000608405 714 ntBASIC20.99■□□□□ 0.95
USP25Q9UHP3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.99■□□□□ 0.95
USP25Q9UHP3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
USP25Q9UHP3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP25Q9UHP3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP25Q9UHP3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP25Q9UHP3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP25Q9UHP3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP25Q9UHP3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP25Q9UHP3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP25Q9UHP3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP25Q9UHP3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP25Q9UHP3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP25Q9UHP3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP25Q9UHP3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP25Q9UHP3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.98■□□□□ 0.95
USP25Q9UHP3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP25Q9UHP3 AC138028.4-201ENST00000564984 1845 ntBASIC20.97■□□□□ 0.95
USP25Q9UHP3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
USP25Q9UHP3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
USP25Q9UHP3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms