Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRFN1Q9P244 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 AL353692.3-201ENST00000407031 1396 ntBASIC16.79■□□□□ 0.28
LRFN1Q9P244 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.79■□□□□ 0.28
LRFN1Q9P244 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRFN1Q9P244 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 TPM4P1-201ENST00000436100 807 ntBASIC16.78■□□□□ 0.28
LRFN1Q9P244 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 NUS1P1-201ENST00000446295 882 ntBASIC16.78■□□□□ 0.28
LRFN1Q9P244 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 AC008687.5-201ENST00000593746 558 ntBASIC16.78■□□□□ 0.28
LRFN1Q9P244 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
LRFN1Q9P244 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRFN1Q9P244 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.77■□□□□ 0.28
LRFN1Q9P244 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.77■□□□□ 0.28
LRFN1Q9P244 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.77■□□□□ 0.28
LRFN1Q9P244 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.77■□□□□ 0.28
LRFN1Q9P244 AC012615.1-201ENST00000565797 1299 ntBASIC16.77■□□□□ 0.28
LRFN1Q9P244 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.77■□□□□ 0.28
LRFN1Q9P244 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 AC124864.1-201ENST00000623408 392 ntBASIC16.77■□□□□ 0.28
LRFN1Q9P244 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.77■□□□□ 0.28
LRFN1Q9P244 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRFN1Q9P244 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.77■□□□□ 0.28
LRFN1Q9P244 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRFN1Q9P244 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRFN1Q9P244 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
LRFN1Q9P244 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRFN1Q9P244 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRFN1Q9P244 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.77■□□□□ 0.27
LRFN1Q9P244 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRFN1Q9P244 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRFN1Q9P244 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRFN1Q9P244 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRFN1Q9P244 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRFN1Q9P244 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.77■□□□□ 0.27
LRFN1Q9P244 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRFN1Q9P244 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms