Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 LIN28AP1-201ENST00000429574 405 ntBASIC18.67■□□□□ 0.58
UBP1Q9NZI7 SEC1P-202ENST00000473944 940 ntBASIC18.67■□□□□ 0.58
UBP1Q9NZI7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 AL138966.2-201ENST00000621997 464 ntBASIC18.67■□□□□ 0.58
UBP1Q9NZI7 AC097493.4-201ENST00000641197 219 ntBASIC18.67■□□□□ 0.58
UBP1Q9NZI7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 AC009102.3-201ENST00000623118 1491 ntBASIC18.66■□□□□ 0.58
UBP1Q9NZI7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 ATP5G1P1-201ENST00000448724 379 ntBASIC18.66■□□□□ 0.58
UBP1Q9NZI7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 AC005363.2-201ENST00000618631 242 ntBASIC18.66■□□□□ 0.58
UBP1Q9NZI7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 AL133373.2-201ENST00000623187 2828 ntBASIC18.66■□□□□ 0.58
UBP1Q9NZI7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBP1Q9NZI7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 MIR149-201ENST00000384879 89 ntBASIC18.65■□□□□ 0.58
UBP1Q9NZI7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 AC010240.3-201ENST00000607688 395 ntBASIC18.65■□□□□ 0.58
UBP1Q9NZI7 AL023973.1-201ENST00000624619 620 ntBASIC18.65■□□□□ 0.58
UBP1Q9NZI7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBP1Q9NZI7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.64■□□□□ 0.58
UBP1Q9NZI7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UBP1Q9NZI7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UBP1Q9NZI7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
UBP1Q9NZI7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBP1Q9NZI7 GMCL1P1-201ENST00000463439 1581 ntBASIC18.64■□□□□ 0.58
UBP1Q9NZI7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 REXO1L9P-201ENST00000604264 2108 ntBASIC18.64■□□□□ 0.57
UBP1Q9NZI7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms