Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.17■□□□□ 0.02
CALYQ9NYX4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.17■□□□□ 0.02
CALYQ9NYX4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 NEK4P2-201ENST00000580004 1012 ntBASIC15.17■□□□□ 0.02
CALYQ9NYX4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 AC010240.3-201ENST00000607688 395 ntBASIC15.17■□□□□ 0.02
CALYQ9NYX4 AC024243.1-201ENST00000609234 778 ntBASIC15.17■□□□□ 0.02
CALYQ9NYX4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CALYQ9NYX4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CALYQ9NYX4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.16■□□□□ 0.02
CALYQ9NYX4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 AP000523.1-201ENST00000398242 1049 ntBASIC15.16■□□□□ 0.02
CALYQ9NYX4 ECEL1P3-201ENST00000427961 737 ntBASIC15.16■□□□□ 0.02
CALYQ9NYX4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CALYQ9NYX4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CALYQ9NYX4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CALYQ9NYX4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CALYQ9NYX4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CALYQ9NYX4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CALYQ9NYX4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CALYQ9NYX4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CALYQ9NYX4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CALYQ9NYX4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CALYQ9NYX4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 SEC1P-202ENST00000473944 940 ntBASIC15.15■□□□□ 0.02
CALYQ9NYX4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.15■□□□□ 0.02
CALYQ9NYX4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms