Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
SLC52A3Q9NQ40 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC52A3Q9NQ40 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC52A3Q9NQ40 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC52A3Q9NQ40 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC52A3Q9NQ40 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC52A3Q9NQ40 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 SLC25A1P4-201ENST00000567977 778 ntBASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 CD177P1-201ENST00000606252 935 ntBASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC52A3Q9NQ40 AC022211.2-201ENST00000585075 2527 ntBASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 AP001094.4-201ENST00000579008 2176 ntBASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC52A3Q9NQ40 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 AL355312.1-201ENST00000407115 2176 ntBASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 LINC00602-201ENST00000629776 2065 ntBASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC52A3Q9NQ40 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 KRT8P7-201ENST00000533003 1432 ntBASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC52A3Q9NQ40 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms