Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 PCED1CP-201ENST00000419887 785 ntBASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 AL358472.4-201ENST00000633140 710 ntBASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 AP000550.4-202ENST00000639755 178 ntBASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP13A3Q9H7F0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 KRT18P48-201ENST00000434763 852 ntBASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP13A3Q9H7F0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 AL162741.1-201ENST00000565563 1558 ntBASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 IER3-202ENST00000376377 1350 ntBASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP13A3Q9H7F0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ATP13A3Q9H7F0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP13A3Q9H7F0 KRT89P-201ENST00000620027 1478 ntBASIC18.46■□□□□ 0.55
ATP13A3Q9H7F0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP13A3Q9H7F0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP13A3Q9H7F0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATP13A3Q9H7F0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP13A3Q9H7F0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP13A3Q9H7F0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP13A3Q9H7F0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms